This isn't exactly what you're looking for, but Moritz Klein employs a fairly intuitive method of manually drawing a connection diagram on dot grid paper for transferring a wiring schematic to solderable protoboard in his video on designing an analog synth VCO, (see "Stripboard layout design" @ 6:19 and onwards).
As he points out, it's a bit labour-intensive, but it can net some great results.
https://youtu.be/OCAb2UoSPs0?feature=shared&t=379
And as a sidenote, most electronic CAD software comes bundled with or is integrable with PCB design software, but that kind of cuts out the breadboard middleman, which you might not find desirable if you're just prototyping. Admittedly, figuring out which CAD software you prefer is a whole other rabbit hole.
My best advice when breadboarding is to make connections/jumpers as short as is reasonable and manipulable without sacrificing visual clarity of what the circuit's doing. When in doubt, err on the side of understanding how it all connects, which might mean bigger breadboards and longer jumpers.