nf-core-modules/modules/nf-core at master · AlexVCaron/nf-core-modules

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Name		Name	Last commit message	Last commit date
parent directory ..
abacas		abacas
abricate		abricate
abritamr/run		abritamr/run
adapterremoval		adapterremoval
adapterremovalfixprefix		adapterremovalfixprefix
admixture		admixture
affy/justrma		affy/justrma
agat		agat
agrvate		agrvate
ale		ale
allelecounter		allelecounter
ampcombi		ampcombi
ampcombi2		ampcombi2
ampir		ampir
amplify/predict		amplify/predict
amps		amps
amrfinderplus		amrfinderplus
angsd		angsd
annotsv		annotsv
anota2seq/anota2seqrun		anota2seq/anota2seqrun
antismash		antismash
arcashla/extract		arcashla/extract
aria2		aria2
ariba		ariba
arriba		arriba
art/illumina		art/illumina
artic		artic
ascat		ascat
ashlar		ashlar
assemblyscan		assemblyscan
ataqv		ataqv
atlas		atlas
atlasgeneannotationmanipulation/gtf2featureannotation		atlasgeneannotationmanipulation/gtf2featureannotation
authentict/deam2cont		authentict/deam2cont
backsub		backsub
bacphlip		bacphlip
bakta		bakta
bam2fastx/bam2fastq		bam2fastx/bam2fastq
bamaligncleaner		bamaligncleaner
bamclipper		bamclipper
bamcmp		bamcmp
bamstats/generalstats		bamstats/generalstats
bamtools		bamtools
bamutil/trimbam		bamutil/trimbam
bandage/image		bandage/image
barrnap		barrnap
bases2fastq		bases2fastq
basicpy		basicpy
bbmap		bbmap
bcftools		bcftools
bcl2fastq		bcl2fastq
bclconvert		bclconvert
beagle5/beagle		beagle5/beagle
bedgovcf		bedgovcf
bedops		bedops
bedtools		bedtools
bioawk		bioawk
biobambam		biobambam
biohansel		biohansel
biscuit		biscuit
bismark		bismark
blast		blast
blat		blat
bowtie		bowtie
bowtie2		bowtie2
bracken		bracken
busco		busco
bwa		bwa
bwamem2		bwamem2
bwameme		bwameme
bwameth		bwameth
cadd		cadd
calder2		calder2
canu		canu
cat		cat
cdhit		cdhit
celesta		celesta
cellpose		cellpose
cellranger		cellranger
cellrangerarc		cellrangerarc
cellrangeratac		cellrangeratac
cellsnp/modea		cellsnp/modea
centrifuge		centrifuge
checkm		checkm
checkm2		checkm2
checkv		checkv
chopper		chopper
chromap		chromap
chromograph		chromograph
circexplorer2		circexplorer2
circularmapper/circulargenerator		circularmapper/circulargenerator
clame		clame
clippy		clippy
clonalframeml		clonalframeml
clustalo		clustalo
cmseq/polymut		cmseq/polymut
cnvkit		cnvkit
cnvnator		cnvnator
cnvpytor		cnvpytor
cobrameta		cobrameta

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