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Erkison
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modules
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Commits on Mar 24, 2021
Merge branch 'master' into master
drpatelh
authored
f19d2fe
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Update shovill module (#337)
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rpetit3
and
FloWuenne
authored
3f14b1f
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ucsc_bed12tobigbed (previous pull request had conflicts) (#302)
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yuukiiwa
authored
af3bc22
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Add process label to prokka (#350)
rpetit3
authored
a13d859
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add vcftools module (#334)
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Mark-S-Hill
authored
399b580
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Commits on Mar 23, 2021
Homer (#330)
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KevinMenden
authored
fe8a783
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Prodigal (#333)
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grst
authored
e33860a
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Add default output dir for modules that create indices, updated (#336)
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JoseEspinosa
authored
ee90e7a
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modified the samtools/fastq module (#339)
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suzannejin
and
suzannejin
authored
d6850f8
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Add gatk4/baserecalibrator (#327)
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yocra3
authored
5e3c9df
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run tests
Erkison
committed
a5e8796
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remove todo
Erkison
committed
6f9cefe
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Add in OptiType (configbuilder, type) module(s) (#301)
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apeltzer
and
KevinMenden
authored
d13e22d
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Add docs for running tests locally with pytest (#338)
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drpatelh
authored
246011f
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add flash module
Erkison
committed
9e6c4d5
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Add alleleCounter module (#313)
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fullama
and
grst
authored
3d720a2
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Add gatk4/applybqsr (#331)
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yocra3
authored
614d61d
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new module: samtools/fastq (#316)
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suzannejin
authored
9115c12
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Add readgroup to bam files (#324)
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yocra3
authored
569ff03
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add prokka module (#298)
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rpetit3
authored
c2aa95c
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Commits on Mar 22, 2021
ci: Add 21.03.0 version to matrix (#317)
edmundmiller
authored
1fc4aa2
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cnvkit module (#173)
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4 people
authored
8a2a9f7
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add gatk4/fastqtosam #198 (#311)
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3 people
authored
53109d5
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Update main.nf (#314)
maxulysse
authored
0a4fa50
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new module: AdapterRemoval (#309)
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maxibor
and
drpatelh
authored
aa76c6d
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Adding unicycler module (#307)
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JoseEspinosa
authored
cfa8f64
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Add link to issue in pull request template (#312)
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grst
authored
bed31cd
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methyldackel: bump version to 0.5.2 (#305)
phue
authored
c736022
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bismark: remove underscores from process names (#303)
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phue
authored
7fe6f9f
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add picard_collectwgsmetrics (#304)
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3 people
authored
592002a
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add bismark/summary (#295)
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phue
authored
eb91789
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add samtools merge (#296)
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yuukiiwa
authored
134c8ef
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add bismark/report (#297)
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phue
authored
f9ce866
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Commits on Mar 20, 2021
add bismark/methylation_extractor (#274)
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phue
and
drpatelh
authored
04704c2
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Commits on Mar 19, 2021
feature: add new issue template for creating new module (#283)
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maxulysse
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KevinMenden
authored
e61f400
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