Skip to content
Navigation Menu
Toggle navigation
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Spark
Build and deploy intelligent apps
GitHub Models
Manage and compare prompts
MCP Registry
New
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search or jump to...
Search code, repositories, users, issues, pull requests...
Search syntax tips
Provide feedback
Saved searches
Use saved searches to filter your results more quickly
Sign in
Sign up
Appearance settings
Resetting focus
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
jen-reeve
/
modules
Public
forked from
nf-core/modules
Notifications
You must be signed in to change notification settings
Fork
0
Star
0
Code
Pull requests
0
Actions
Projects
Security
0
Insights
Additional navigation options
Code
Pull requests
Actions
Projects
Security
Insights
Commits
Branch selector
master
User selector
All users
All time
Commit History
Commits on Mar 26, 2025
Add @pinin4fjords as codeowner on key contributions (#8135)
pinin4fjords
authored
d9552cd
Copy full SHA for d9552cd
add seqtk_comp module (#8104)
Show description for 1e88341
sainsachiko
and
mahesh-panchal
authored
1e88341
Copy full SHA for 1e88341
Migrate `GEM2_GEMINDEXED` to nf-test (#8128)
Show description for f27081c
LouisLeNezet
authored
f27081c
Copy full SHA for f27081c
[MODULE] new branch with polypolish module due to strange changes mad… (#8099)
Show description for 3b0bb5d
ktrappe
and
jfy133
authored
3b0bb5d
Copy full SHA for 3b0bb5d
Migrate nf-test for Snapaligner/align (#8117)
Show description for 77bdd7e
delfiterradas
and
SPPearce
authored
77bdd7e
Copy full SHA for 77bdd7e
Delete all tag.yml + relative path in antismash/antismashlite tests (#8116)
Show description for 05954da
maxulysse
authored
05954da
Copy full SHA for 05954da
Plinkpca (#7981)
Show description for a63b97e
26 people
authored
a63b97e
Copy full SHA for a63b97e
unify angsd gl configs (#8114)
mahesh-panchal
authored
778b14d
Copy full SHA for 778b14d
updated meta to consistent naming scheme (#8112)
ilight1542
authored
ae5c14d
Copy full SHA for ae5c14d
update spades (#8106)
Show description for bd50ef8
saramonzon
authored
bd50ef8
Copy full SHA for bd50ef8
Add DREP/COMAPRE (#8084)
Show description for 6261997
jfy133
authored
6261997
Copy full SHA for 6261997
Update mapAD (#7974)
jch-13
authored
e21f9ea
Copy full SHA for e21f9ea
Added deepcell/mesmer stub (#8105)
Show description for b3aa568
kbestak
authored
b3aa568
Copy full SHA for b3aa568
Module for plink2 indep_pairwise (#8082)
Show description for 1df414d
3 people
authored
1df414d
Copy full SHA for 1df414d
Updated tabix modules to latest version (#8103)
Show description for 118a005
saramonzon
authored
118a005
Copy full SHA for 118a005
add module spkeeplongestisoform - Fix #7892 (#8079)
Show description for 4b3afb5
Juke34
and
maxulysse
authored
4b3afb5
Copy full SHA for 4b3afb5
Migrate `ENTREZDIRECT_ESEARCH` to nf-test (#8098)
Show description for 86e6926
LouisLeNezet
and
SPPearce
authored
86e6926
Copy full SHA for 86e6926
Add wget module (#8097)
Show description for 5f3bfac
itrujnara
and
LouisLeNezet
authored
5f3bfac
Copy full SHA for 5f3bfac
Remove environment.yml from imc2mc (#8077)
SPPearce
authored
d2334a6
Copy full SHA for d2334a6
Migrate `expansionhunterdenovo/merge` to nf-test (#8100)
Show description for af77f37
LouisLeNezet
authored
af77f37
Copy full SHA for af77f37
Migrate `DUPHOLD` to nf-test (#8080)
Show description for 21091da
LouisLeNezet
authored
21091da
Copy full SHA for 21091da
ultra/pipeline nf-test conversion (#7959)
Show description for ccb20c5
SPPearce
and
awgymer
authored
ccb20c5
Copy full SHA for ccb20c5
Added ilastik/pixelclassification nf-test (#7810)
Show description for ac6790d
kbestak
authored
ac6790d
Copy full SHA for ac6790d
new podule plink2/het (#8081)
Show description for d4c48c7
RuthEberhardt
authored
d4c48c7
Copy full SHA for d4c48c7
Migrate `entrezdirect_xtract` to nf-test (#8096)
Show description for c509557
LouisLeNezet
authored
c509557
Copy full SHA for c509557
Migrate `ENDORSPY` to nf-test (#8095)
Show description for 97e1635
LouisLeNezet
authored
97e1635
Copy full SHA for 97e1635
Migrate `BIOHANSEL` to nf-test (#7964)
Show description for c61284f
LouisLeNezet
and
sateeshperi
authored
c61284f
Copy full SHA for c61284f
[New module] Infernal cmsearch (#8026)
Show description for 7a7c0a0
prototaxites
and
famosab
authored
7a7c0a0
Copy full SHA for 7a7c0a0
Migrate `DEEPTMHMM` to nf-test (#8067)
Show description for c09a102
3 people
authored
c09a102
Copy full SHA for c09a102
Migrate `EIGENSTRATSNPCOVERAGE` to nf-test (#8088)
Show description for 7cc4017
LouisLeNezet
and
SPPearce
authored
7cc4017
Copy full SHA for 7cc4017
Add new module samtools/bedcov (#8093)
Show description for 5155eda
ToonRosseel
and
nvnieuwk
authored
5155eda
Copy full SHA for 5155eda
Migrate `ELPREP_MERGE` to nf-test (#8092)
Show description for df924db
LouisLeNezet
authored
df924db
Copy full SHA for df924db
update peddy with possibility to feed in a sites file (#7955)
Show description for e1c5e2e
rannick
and
fellen31
authored
e1c5e2e
Copy full SHA for e1c5e2e
Plink2vcf2bgen module (#8009)
Show description for 565c264
edg1983
authored
565c264
Copy full SHA for 565c264
Updated unicycler module to latest version (#8064)
Show description for 0335715
saramonzon
authored
0335715
Copy full SHA for 0335715
Pagination
Previous
Next
You can’t perform that action at this time.