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jianhong
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modules
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Commits on Sep 17, 2025
Fix: fix meta.yml file (#9090)
antoniasaracco
authored
4009f11
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Fix: fix decoupler module import (#9089)
antoniasaracco
authored
9997441
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fix TAG assignment in installannotations (#9086)
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manascripts
authored
298d07f
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Update ultra/pipeline (#9085)
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SPPearce
authored
8234c94
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Bump `manta` build (#9084)
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matthdsm
authored
ae6b18e
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Update module tinc (#9083)
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valerianilucrezia
authored
3369ae4
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Reduce resources usage of `last/split` from high to medium. (#9080)
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charles-plessy
authored
3107c62
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Commits on Sep 16, 2025
Decoupler (#8893)
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antoniasaracco
authored
4ac8159
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bump annotsv modules to v3.5.3 and add version tag to install_annotations (lgmgeo/AnnotSV#296) (#9061)
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3 people
authored
3a1c1c3
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new module: strobealign (#9076)
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matthdsm
authored
c698799
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New module: ctree (#8696)
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elena-buscaroli
and
SPPearce
authored
74465cf
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bump vep to 115.1 (#9072)
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matthdsm
authored
f9234d3
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Commits on Sep 15, 2025
Update mgikit 2.1.0 (#9058)
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ziadbkh
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matthdsm
authored
cc983a9
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fix: Improve samtools flagstat stub to generate realistic output (#9064)
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edmundmiller
authored
e334e12
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Update sentieon rsem (#9063)
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pinin4fjords
authored
d9cd3c8
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bump picard (#9031)
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4 people
authored
df124e8
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update varlociraptor modules (#9059)
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famosab
and
matthdsm
authored
36cf856
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Bulk update `bcftools` (#9039)
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matthdsm
authored
f17049e
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Add alignment input possibility for rsem and tidy up tests (#9048)
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pinin4fjords
authored
82cd92d
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New module - Opt (off target probe tracker) (#9056)
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khersameesh24
authored
66d5baa
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Commits on Sep 14, 2025
chore(deps): update tj-actions/changed-files action to v47
renovate[bot]
authored
7ec565e
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Commits on Sep 12, 2025
Revert "Automated nf-test snapshot update workflow (#9026)" (#9051)
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ewels
authored
86fc8a6
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Revert: --update-snapshot makes the tests pass (#9050)
ewels
authored
22cb35b
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Snapshots artefacts: only upload modified files (#9049)
ewels
authored
3784c50
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Add Sawfish discover (#8992)
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3 people
authored
79e07ba
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more snapshots tomfoolery (#9047)
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ewels
authored
e4760ca
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chore(deps): update github actions
renovate[bot]
authored
837b44c
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chore(deps): pin dependencies
renovate[bot]
authored
9d02043
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Allow JasmineSV to take `bai` (#9046)
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awgymer
authored
a70dc7e
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Update and improve CLAIR3 (#8964)
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awgymer
authored
ce30f33
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Commits on Sep 11, 2025
Fix HOSTILE_CLEAN index input (#9037)
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jfy133
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SPPearce
authored
cbe28fb
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Rewrite script to find uploaded snapshot artefacts (#9038)
ewels
authored
c534903
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Remove the snapshots helper comment (#9036)
ewels
authored
21e3cfe
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bulk bump samtools modules (#9025)
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matthdsm
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nf-core-bot
authored
c8be52d
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bump sourmash versions to 4.9.4 (#9030)
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Midnighter
and
jfy133
authored
30c7ada
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