Shift-E on point elements doesn't retain annotations (i.e. additional DataFrame columns) #367
Description
Thanks for this awesome package!
I just wanted to quickly leave the following report here:
After viewing a points element in napari and saving it back to the SpatialData object using "Shift-E", annotations are not retained.
Reproducer:
from spatialdata import SpatialData from spatialdata.models import PointsModel import pandas as pd sdata = SpatialData() sdata['points'] = PointsModel.parse( pd.DataFrame({ 'x': [1, 2], 'y': [3, 4], 'category': ['A', 'B'], }), ) sdata['points'].columns # Index(['x', 'y', 'category'], dtype='object') from napari_spatialdata import Interactive interactive = Interactive(sdata) interactive.add_element("points", "global") # press Shift-E sdata['points'].columns # sdata['points'].columns # no longer contains column 'category' (no longer contains column 'category')Versions used:
napari_spatialdata.__version__: 0.5.4.post0 spatialdata.__version__: 0.4.0