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    Did you run make before make install? You are also likely to need development packages to compile. Commented Mar 29, 2017 at 18:12
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    ALSO, read up about persistent storage for live mediums. It looks like the real game changer for your issue Commented Mar 29, 2017 at 18:13
  • @Bruno9779 for first comment I edited my question above. For second comment, I know for persistence and already tried different tutorials and none of them unfortunately didn't work. Commented Mar 29, 2017 at 18:33
  • Why do you download the source code and try to compile it, instead of downloading the binary .deb (the one apt-get install xdotool would also fetch and install, without compiling)? Commented Mar 30, 2017 at 0:11