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Pull requests list

Merge-template-3.5.1
#481 by JoseEspinosa was merged Nov 21, 2025 Loading…
4
Important! Template update for nf-core/tools v3.5.1
#480 by nf-core-bot was merged Nov 21, 2025 Loading…
Important! Template update for nf-core/tools v3.4.1
#476 by nf-core-bot was merged Nov 21, 2025 Loading…
Implement nf-test
#475 by edmundmiller was merged Sep 5, 2025 Loading… 2.2
@edmundmiller
4
Important! Template update for nf-core/tools v3.3.2
#473 by nf-core-bot was merged Sep 3, 2025 Loading…
@edmundmiller
Use --bga when creating bigWigs
#470 by edmundmiller was merged Sep 17, 2025 Loading… 2.2
1
@edmundmiller
18
Important! Template update for nf-core/tools v3.3.1
#464 by nf-core-bot was closed Jul 8, 2025 Loading…
1
Merging template 3.2.1
#462 by JoseEspinosa was merged May 9, 2025 Loading…
4 tasks done
4
Important! Template update for nf-core/tools v3.2.1
#461 by nf-core-bot was merged May 9, 2025 Loading…
fix required column number for samplesheet
#460 by tavareshugo was closed Apr 14, 2025 Loading…
2 of 11 tasks
1
Fixes parametrization of SUBREAD_FEATURECOUNTS depending on meta.single_read
#453 by JoseEspinosa was merged Mar 12, 2025 Loading…
4 tasks done
5
Merging-template-3.2.0
#449 by JoseEspinosa was merged Feb 26, 2025 Loading…
5 tasks done
4
Important! Template update for nf-core/tools v3.2.0
#447 by nf-core-bot was merged Feb 26, 2025 Loading…
Important! Template update for nf-core/tools v3.1.2
#446 by nf-core-bot was closed Jan 27, 2025 Loading…
1
Merge template version 3.1.1
#445 by JoseEspinosa was merged Jan 10, 2025 Loading…
4
Fix GFFREAD when gff file provided by user (add empty map to channel) @JoseEspinosa
#444 by JoseEspinosa was merged Dec 24, 2024 Loading…
5 tasks done
3
Important! Template update for nf-core/tools v3.1.1
#443 by nf-core-bot was merged Jan 10, 2025 Loading…
Important! Template update for nf-core/tools v3.1.0
#439 by nf-core-bot was closed Dec 20, 2024 Loading…
1
Fix multiqc skip
#438 by LeonHafner was merged Dec 23, 2024 Loading…
3 of 11 tasks
3
correct merging error
#437 by ftabaro was closed Jan 10, 2025 Loading…
5
Fix multiqc shared mem error
#436 by ftabaro was merged Jan 8, 2025 Loading…
13
Fix GFFREAD
#435 by ftabaro was merged Nov 26, 2024 Loading…
2 of 3 tasks
29
Prevent pipeline fails from erroneous param validation when igenomes is used
#434 by JoseEspinosa was merged Nov 20, 2024 Loading…
5 tasks done
2
Prevent pipeline fails from erroneous param validation when igenomes is used
#433 by JoseEspinosa was closed Nov 20, 2024 Loading…
5 tasks done
2
Trimgalore nextseq correction
#430 by cmatKhan was closed Oct 21, 2024 Loading…
2
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