feat!: Enable reading JSON data with dbjson extension dtype (#1139)

This change updates how we handle JSON data types read from BigQuery. Previously, BigQuery JSON types were treated as generic large strings within our system. To improve accuracy and functionality, we now map them to a dedicated JSON data type (db_dtypes.JSONType or db_dtypes.JSONArrowType for pyarrow). While this provides a more appropriate representation of JSON data, it's important to note that this feature is still in preview and may evolve. Co-authored-by: Owl Bot <gcf-owl-bot[bot]@users.noreply.github.com> Co-authored-by: Tim Sweña (Swast) <swast@google.com> Release-As: 1.34.0

Author: 3 people

bigframes/bigquery/_operations/json.py

@@ -53,7 +53,7 @@ def json_set(
  >>> s = bpd.read_gbq("SELECT JSON '{\\\"a\\\": 1}' AS data")["data"]
  >>> bbq.json_set(s, json_path_value_pairs=[("$.a", 100), ("$.b", "hi")])
  0 {"a":100,"b":"hi"}
- Name: data, dtype: large_string[pyarrow]
+ Name: data, dtype: dbjson
 
  Args:
  input (bigframes.series.Series):
@@ -253,7 +253,7 @@ def parse_json(
  dtype: string
  >>> bbq.parse_json(s)
  0 {"class":{"students":[{"id":5},{"id":12}]}}
- dtype: large_string[pyarrow]
+ dtype: dbjson
 
  Args:
  input (bigframes.series.Series):

bigframes/core/__init__.py

@@ -108,8 +108,8 @@ def from_table(
  raise ValueError("must set at most one of 'offests', 'primary_key'")
  if any(i.field_type == "JSON" for i in table.schema if i.name in schema.names):
  msg = (
- "Interpreting JSON column(s) as pyarrow.large_string. "
- "This behavior may change in future versions."
+ "Interpreting JSON column(s) as the `db_dtypes.dbjson` extension type is"
+ "in preview; this behavior may change in future versions."
  )
  warnings.warn(msg, bfe.PreviewWarning)
  # define data source only for needed columns, this makes row-hashing cheaper

bigframes/core/compile/ibis_types.py

@@ -16,7 +16,6 @@
 import textwrap
 import typing
 from typing import Any, cast, Dict, Iterable, Optional, Tuple, Union
-import warnings
 
 import bigframes_vendored.constants as constants
 import bigframes_vendored.ibis
@@ -26,14 +25,14 @@
  dtype as python_type_to_ibis_type,
 )
 import bigframes_vendored.ibis.expr.types as ibis_types
+import db_dtypes # type: ignore
 import geopandas as gpd # type: ignore
 import google.cloud.bigquery as bigquery
 import numpy as np
 import pandas as pd
 import pyarrow as pa
 
 import bigframes.dtypes
-import bigframes.exceptions as bfe
 
 # Type hints for Ibis data types supported by BigQuery DataFrame
 IbisDtype = Union[
@@ -76,7 +75,7 @@
  ibis_dtypes.GeoSpatial(geotype="geography", srid=4326, nullable=True),
  gpd.array.GeometryDtype(),
  ),
- (ibis_dtypes.json, pd.ArrowDtype(pa.large_string())),
+ (ibis_dtypes.json, db_dtypes.JSONDtype()),
 )
 
 BIGFRAMES_TO_IBIS: Dict[bigframes.dtypes.Dtype, ibis_dtypes.DataType] = {
@@ -305,13 +304,7 @@ def ibis_dtype_to_bigframes_dtype(
  if isinstance(ibis_dtype, ibis_dtypes.Integer):
  return pd.Int64Dtype()
 
- # Temporary: Will eventually support an explicit json type instead of casting to string.
  if isinstance(ibis_dtype, ibis_dtypes.JSON):
- msg = (
- "Interpreting JSON column(s) as pyarrow.large_string. This behavior may change "
- "in future versions."
- )
- warnings.warn(msg, category=bfe.PreviewWarning)
  return bigframes.dtypes.JSON_DTYPE
 
  if ibis_dtype in IBIS_TO_BIGFRAMES:

bigframes/core/compile/scalar_op_compiler.py

@@ -1188,34 +1188,33 @@ def array_slice_op_impl(x: ibis_types.Value, op: ops.ArraySliceOp):
 # JSON Ops
 @scalar_op_compiler.register_binary_op(ops.JSONSet, pass_op=True)
 def json_set_op_impl(x: ibis_types.Value, y: ibis_types.Value, op: ops.JSONSet):
- if x.type().is_json():
- return json_set(
- json_obj=x,
- json_path=op.json_path,
- json_value=y,
- )
- else:
- # Enabling JSON type eliminates the need for less efficient string conversions.
- return to_json_string(
- json_set( # type: ignore
- json_obj=parse_json(json_str=x),
- json_path=op.json_path,
- json_value=y,
- )
- )
+ return json_set(json_obj=x, json_path=op.json_path, json_value=y)
 
 
 @scalar_op_compiler.register_unary_op(ops.JSONExtract, pass_op=True)
 def json_extract_op_impl(x: ibis_types.Value, op: ops.JSONExtract):
- if x.type().is_json():
- return json_extract(json_obj=x, json_path=op.json_path)
- # json string
- return json_extract_string(json_obj=x, json_path=op.json_path)
+ # Define a user-defined function whose returned type is dynamically matching the input.
+ def json_extract(json_or_json_string, json_path: ibis_dtypes.str): # type: ignore
+ """Extracts a JSON value and converts it to a SQL JSON-formatted STRING or JSON value."""
+ ...
+
+ return_type = x.type()
+ json_extract.__annotations__["return"] = return_type
+ json_extract_op = ibis_udf.scalar.builtin(json_extract)
+ return json_extract_op(json_or_json_string=x, json_path=op.json_path)
 
 
 @scalar_op_compiler.register_unary_op(ops.JSONExtractArray, pass_op=True)
 def json_extract_array_op_impl(x: ibis_types.Value, op: ops.JSONExtractArray):
- return json_extract_array(json_obj=x, json_path=op.json_path)
+ # Define a user-defined function whose returned type is dynamically matching the input.
+ def json_extract_array(json_or_json_string, json_path: ibis_dtypes.str): # type: ignore
+ """Extracts a JSON value and converts it to a SQL JSON-formatted STRING or JSON value."""
+ ...
+
+ return_type = x.type()
+ json_extract_array.__annotations__["return"] = ibis_dtypes.Array[return_type] # type: ignore
+ json_extract_op = ibis_udf.scalar.builtin(json_extract_array)
+ return json_extract_op(json_or_json_string=x, json_path=op.json_path)
 
 
 @scalar_op_compiler.register_unary_op(ops.JSONExtractStringArray, pass_op=True)
@@ -1937,27 +1936,6 @@ def json_set( # type: ignore[empty-body]
  """Produces a new SQL JSON value with the specified JSON data inserted or replaced."""
 
 
-@ibis_udf.scalar.builtin(name="json_extract")
-def json_extract( # type: ignore[empty-body]
- json_obj: ibis_dtypes.JSON, json_path: ibis_dtypes.String
-) -> ibis_dtypes.JSON:
- """Extracts a JSON value and converts it to a JSON value."""
-
-
-@ibis_udf.scalar.builtin(name="json_extract")
-def json_extract_string( # type: ignore[empty-body]
- json_obj: ibis_dtypes.String, json_path: ibis_dtypes.String
-) -> ibis_dtypes.String:
- """Extracts a JSON SRING value and converts it to a SQL JSON-formatted STRING."""
-
-
-@ibis_udf.scalar.builtin(name="json_extract_array")
-def json_extract_array( # type: ignore[empty-body]
- json_obj: ibis_dtypes.JSON, json_path: ibis_dtypes.String
-) -> ibis_dtypes.Array[ibis_dtypes.String]:
- """Extracts a JSON array and converts it to a SQL ARRAY of JSON-formatted STRINGs or JSON values."""
-
-
 @ibis_udf.scalar.builtin(name="json_extract_string_array")
 def json_extract_string_array( # type: ignore[empty-body]
  json_obj: ibis_dtypes.JSON, json_path: ibis_dtypes.String

bigframes/dtypes.py

@@ -21,6 +21,7 @@
 from typing import Any, Dict, List, Literal, Union
 
 import bigframes_vendored.constants as constants
+import db_dtypes # type: ignore
 import geopandas as gpd # type: ignore
 import google.cloud.bigquery
 import numpy as np
@@ -59,7 +60,7 @@
 # No arrow equivalent
 GEO_DTYPE = gpd.array.GeometryDtype()
 # JSON
-JSON_DTYPE = pd.ArrowDtype(pa.large_string())
+JSON_DTYPE = db_dtypes.JSONDtype()
 OBJ_REF_DTYPE = pd.ArrowDtype(
  pa.struct(
  (
@@ -161,7 +162,7 @@ class SimpleDtypeInfo:
  ),
  SimpleDtypeInfo(
  dtype=JSON_DTYPE,
- arrow_dtype=pa.large_string(),
+ arrow_dtype=db_dtypes.JSONArrowType(),
  type_kind=("JSON",),
  orderable=False,
  clusterable=False,
@@ -320,7 +321,6 @@ def is_struct_like(type_: ExpressionType) -> bool:
 
 
 def is_json_like(type_: ExpressionType) -> bool:
- # TODO: Add JSON type support
  return type_ == JSON_DTYPE or type_ == STRING_DTYPE # Including JSON string
 
 

bigframes/operations/json_ops.py

@@ -50,7 +50,7 @@ def output_type(self, *input_types):
  + f" Received type: {input_type}"
  )
  return pd.ArrowDtype(
- pa.list_(dtypes.bigframes_dtype_to_arrow_dtype(dtypes.STRING_DTYPE))
+ pa.list_(dtypes.bigframes_dtype_to_arrow_dtype(input_type))
  )
 
 
@@ -118,8 +118,7 @@ def output_type(self, *input_types):
  + f"Received type: {right_type}"
  )
 
- # After JSON type implementation, ONLY return JSON data.
- return left_type
+ return dtypes.JSON_DTYPE
 
 
 @dataclasses.dataclass(frozen=True)

bigframes/session/_io/pandas.py

@@ -17,6 +17,7 @@
 from typing import Collection, Union
 
 import bigframes_vendored.constants as constants
+import db_dtypes # type: ignore
 import geopandas # type: ignore
 import numpy as np
 import pandas
@@ -122,6 +123,8 @@ def arrow_to_pandas(
  )
  elif isinstance(dtype, pandas.ArrowDtype):
  series = _arrow_to_pandas_arrowdtype(column, dtype)
+ elif isinstance(dtype, db_dtypes.JSONDtype):
+ series = db_dtypes.JSONArray(column)
  else:
  series = column.to_pandas(types_mapper=lambda _: dtype)
 

setup.py

@@ -62,6 +62,7 @@
  "ipywidgets >=7.7.1",
  "humanize >=4.6.0",
  "matplotlib >=3.7.1",
+ "db-dtypes >=1.4.0",
  # For vendored ibis-framework.
  "atpublic>=2.3,<6",
  "parsy>=2,<3",

testing/constraints-3.9.txt

@@ -26,6 +26,7 @@ tabulate==0.9
 ipywidgets==7.7.1
 humanize==4.6.0
 matplotlib==3.7.1
+db-dtypes==1.4.0
 # For vendored ibis-framework.
 atpublic==2.3
 parsy==2.0

tests/system/small/bigquery/test_json.py

@@ -118,7 +118,6 @@ def test_json_set_w_invalid_series_type():
 def test_json_extract_from_json():
  s = _get_series_from_json([{"a": {"b": [1, 2]}}, {"a": {"c": 1}}, {"a": {"b": 0}}])
  actual = bbq.json_extract(s, "$.a.b").to_pandas()
- # After the introduction of the JSON type, the output should be a JSON-formatted series.
  expected = _get_series_from_json([[1, 2], None, 0]).to_pandas()
  pd.testing.assert_series_equal(
  actual,
@@ -129,12 +128,10 @@ def test_json_extract_from_json():
 def test_json_extract_from_string():
  s = bpd.Series(['{"a": {"b": [1, 2]}}', '{"a": {"c": 1}}', '{"a": {"b": 0}}'])
  actual = bbq.json_extract(s, "$.a.b")
- expected = _get_series_from_json([[1, 2], None, 0])
+ expected = bpd.Series(["[1,2]", None, "0"])
  pd.testing.assert_series_equal(
  actual.to_pandas(),
  expected.to_pandas(),
- check_names=False,
- check_dtype=False, # json_extract returns string type. While _get_series_from_json gives a JSON series (pa.large_string).
  )
 
 
@@ -143,29 +140,68 @@ def test_json_extract_w_invalid_series_type():
  bbq.json_extract(bpd.Series([1, 2]), "$.a")
 
 
+def test_json_extract_array_from_json():
+ s = _get_series_from_json(
+ [{"a": ["ab", "2", "3 xy"]}, {"a": []}, {"a": ["4", "5"]}, {}]
+ )
+ actual = bbq.json_extract_array(s, "$.a")
+
+ # This code provides a workaround for issue https://github.com/apache/arrow/issues/45262,
+ # which currently prevents constructing a series using the pa.list_(db_types.JSONArrrowType())
+ sql = """
+ SELECT 0 AS id, [JSON '"ab"', JSON '"2"', JSON '"3 xy"'] AS data,
+ UNION ALL
+ SELECT 1, [],
+ UNION ALL
+ SELECT 2, [JSON '"4"', JSON '"5"'],
+ UNION ALL
+ SELECT 3, null,
+ """
+ df = bpd.read_gbq(sql).set_index("id").sort_index()
+ expected = df["data"]
+
+ pd.testing.assert_series_equal(
+ actual.to_pandas(),
+ expected.to_pandas(),
+ )
+
+
 def test_json_extract_array_from_json_strings():
- s = bpd.Series(['{"a": ["ab", "2", "3 xy"]}', '{"a": []}', '{"a": ["4","5"]}'])
+ s = bpd.Series(
+ ['{"a": ["ab", "2", "3 xy"]}', '{"a": []}', '{"a": ["4","5"]}', "{}"],
+ dtype=pd.StringDtype(storage="pyarrow"),
+ )
  actual = bbq.json_extract_array(s, "$.a")
- expected = bpd.Series([['"ab"', '"2"', '"3 xy"'], [], ['"4"', '"5"']])
+ expected = bpd.Series(
+ [['"ab"', '"2"', '"3 xy"'], [], ['"4"', '"5"'], None],
+ dtype=pd.StringDtype(storage="pyarrow"),
+ )
  pd.testing.assert_series_equal(
  actual.to_pandas(),
  expected.to_pandas(),
  )
 
 
-def test_json_extract_array_from_array_strings():
- s = bpd.Series(["[1, 2, 3]", "[]", "[4,5]"])
+def test_json_extract_array_from_json_array_strings():
+ s = bpd.Series(
+ ["[1, 2, 3]", "[]", "[4,5]"],
+ dtype=pd.StringDtype(storage="pyarrow"),
+ )
  actual = bbq.json_extract_array(s)
- expected = bpd.Series([["1", "2", "3"], [], ["4", "5"]])
+ expected = bpd.Series(
+ [["1", "2", "3"], [], ["4", "5"]],
+ dtype=pd.StringDtype(storage="pyarrow"),
+ )
  pd.testing.assert_series_equal(
  actual.to_pandas(),
  expected.to_pandas(),
  )
 
 
 def test_json_extract_array_w_invalid_series_type():
+ s = bpd.Series([1, 2])
  with pytest.raises(TypeError):
- bbq.json_extract_array(bpd.Series([1, 2]))
+ bbq.json_extract_array(s)
 
 
 def test_json_extract_string_array_from_json_strings():
@@ -203,14 +239,6 @@ def test_json_extract_string_array_w_invalid_series_type():
  bbq.json_extract_string_array(bpd.Series([1, 2]))
 
 
-# b/381148539
-def test_json_in_struct():
- df = bpd.read_gbq(
- "SELECT STRUCT(JSON '{\\\"a\\\": 1}' AS data, 1 AS number) as struct_col"
- )
- assert df["struct_col"].struct.field("data")[0] == '{"a":1}'
-
-
 def test_parse_json_w_invalid_series_type():
  with pytest.raises(TypeError):
  bbq.parse_json(bpd.Series([1, 2]))