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    $\begingroup$ To be safe, why not provide both the CDF file and the notebook? $\endgroup$ Commented Nov 2, 2012 at 15:30
  • $\begingroup$ @J.M. I don't want to overload the supporting information with what would be duplicate information… I have meanwhile had the idea for another possibility (PDF), and thus edited the question. $\endgroup$ Commented Nov 2, 2012 at 15:38
  • $\begingroup$ @J.M. A CDF file can be opened in Mathematica and, in my experience, works just like a notebook in that context. What's the advantage of publishing both? I think I'd go with CDF so that anyone can read it. $\endgroup$ Commented Nov 2, 2012 at 15:55
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    $\begingroup$ @F'x You have probably already tried to do as you planned. Could you please give a feedback. Did it work smoothly? Did the journal accept this form of the Supplementing Materials? Where could we have a look at it? Have you some further advises for those who choose to follow this way? $\endgroup$ Commented Aug 14, 2013 at 11:19
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    $\begingroup$ @F'x, so how did it go in the end? $\endgroup$ Commented Jan 20, 2014 at 18:59