Skip to main content
added 102 characters in body
Source Link
Kuba
  • 138.9k
  • 13
  • 297
  • 803

I would like to measure the density of my western blot band by measuring the area under the peak from this plot.

More specifically, my image will have several lanes with a pattern of bands in each lane (see link below). I would like to select an area and then measure the intensity of the bands as scanned from top to bottom.

I would do this for each lane by selecting same area (essentially move my rectangle over to the new lane) and then plot the density vs length of gel (down direction). I would then like to integrate the area under each curve to get a value which can then be compared to the pattern and density (increased or decreased) of the neighboring lane.

Is this possible to do in MathematicaMathematica and, if so, how can I do it. I'm very new to MathematicaMathematica and any help would greatly be appreciated.

Example Image = http://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.pnghttp://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.png


Keywords: line, lines, spectrum, spectral

I would like to measure the density of my western blot band by measuring the area under the peak from this plot.

More specifically, my image will have several lanes with a pattern of bands in each lane (see link below). I would like to select an area and then measure the intensity of the bands as scanned from top to bottom.

I would do this for each lane by selecting same area (essentially move my rectangle over to the new lane) and then plot the density vs length of gel (down direction). I would then like to integrate the area under each curve to get a value which can then be compared to the pattern and density (increased or decreased) of the neighboring lane.

Is this possible to do in Mathematica and, if so, how can I do it. I'm very new to Mathematica and any help would greatly be appreciated.

Example Image = http://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.png

I would like to measure the density of my western blot band by measuring the area under the peak from this plot.

More specifically, my image will have several lanes with a pattern of bands in each lane (see link below). I would like to select an area and then measure the intensity of the bands as scanned from top to bottom.

I would do this for each lane by selecting same area (essentially move my rectangle over to the new lane) and then plot the density vs length of gel (down direction). I would then like to integrate the area under each curve to get a value which can then be compared to the pattern and density (increased or decreased) of the neighboring lane.

Is this possible to do in Mathematica and, if so, how can I do it. I'm very new to Mathematica and any help would greatly be appreciated.

http://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.png


Keywords: line, lines, spectrum, spectral

added 5 characters in body
Source Link
Dr. belisarius
  • 116.8k
  • 13
  • 208
  • 466

I would like to measure the density of my western blot band by measuring the area under the peak from this plot. More

More specifically, my image will have several lanes with a pattern of bands in each lane (see link below). I would like to select an area and then measure the intensity of the bands as scanned from top to bottom. I

I would do this for each lane by selecting same area (essentially move my rectangle over to the new lane) and then plot the density vs length of gel (down direction). I would then like to integrate the area under each curve to get a value which can then be compared to the pattern and density (increased or decreased) of the neighboring lane. Is

Is this possible to do in Mathematica and, if so, how can I do it. I'm very new to Mathematica and any help would greatly be appreciated. Thanks!

Example Image = http://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.png

I would like to measure the density of my western blot band by measuring the area under the peak from this plot. More specifically, my image will have several lanes with a pattern of bands in each lane (see link below). I would like to select an area and then measure the intensity of the bands as scanned from top to bottom. I would do this for each lane by selecting same area (essentially move my rectangle over to the new lane) and then plot the density vs length of gel (down direction). I would then like to integrate the area under each curve to get a value which can then be compared to the pattern and density (increased or decreased) of the neighboring lane. Is this possible to do in Mathematica and, if so, how can I do it. I'm very new to Mathematica and any help would greatly be appreciated. Thanks!

Example Image = http://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.png

I would like to measure the density of my western blot band by measuring the area under the peak from this plot.

More specifically, my image will have several lanes with a pattern of bands in each lane (see link below). I would like to select an area and then measure the intensity of the bands as scanned from top to bottom.

I would do this for each lane by selecting same area (essentially move my rectangle over to the new lane) and then plot the density vs length of gel (down direction). I would then like to integrate the area under each curve to get a value which can then be compared to the pattern and density (increased or decreased) of the neighboring lane.

Is this possible to do in Mathematica and, if so, how can I do it. I'm very new to Mathematica and any help would greatly be appreciated.

Example Image = http://i2.wp.com/homemadeprojects.org/wp-content/uploads/2014/02/gel.png

edited tags
Link
added 12 characters in body
Source Link
Loading
Source Link
Loading