Timeline for Make does not work when invoked from a bash script
Current License: CC BY-SA 3.0
12 events
| when toggle format | what | by | license | comment | |
|---|---|---|---|---|---|
| Feb 16, 2015 at 9:39 | comment | added | Sander Van der Zeeuw | Thanks for the hint. I will start a new question when i have some time. | |
| Feb 16, 2015 at 9:35 | comment | added | choroba | You should probably start a new question, as asking for several different things in one question is confusing (as we've well demonstrated) and prevents people knowing the answer to only some of them from answering. | |
| Feb 16, 2015 at 9:23 | comment | added | Sander Van der Zeeuw | yes indeed, sorry for my late response was away in the weekend :). If i need to seperate these 2 values i need to create 2 for loops in my bash script and i want to avoid that. Thanks again for helping me out. | |
| Feb 13, 2015 at 14:50 | comment | added | choroba | @SanderVanderZeeuw: Oh, you want to store the pairs of values in the array? | |
| Feb 13, 2015 at 14:45 | comment | added | Sander Van der Zeeuw | If i do it like that it means i am back to the old problem where the for loop is splitting the 2 in seperate lines. Can you give a working example from the bash file I now have it like this: ` mylist=( 'SAMPLES_OUT='$(call list_samples,AON_9,NT_1,SC_17)' GFF='/data/DIV5/SASC/project-013-motor/analysis/runs/BWA_chipcap/BAMS/GFF/H3K4me1.gff'' ` | |
| Feb 13, 2015 at 14:32 | comment | added | choroba | @SanderVanderZeeuw: Check the update. | |
| Feb 13, 2015 at 14:32 | history | edited | choroba | CC BY-SA 3.0 | added 192 characters in body |
| Feb 13, 2015 at 14:10 | comment | added | Sander Van der Zeeuw | Ooh sure sorry ill add it to my question @choroba It should be in the question now ;) thanks for helping me out | |
| Feb 13, 2015 at 14:04 | comment | added | choroba | @SanderVanderZeeuw: Questions in comments aren't readable. | |
| Feb 13, 2015 at 14:01 | comment | added | Sander Van der Zeeuw | I have one more question to you can you tell what would happen if i want for example another variable passed to the make file like this: '$(call list_samples,AON_9,NT_1,SC_17) GFF=/data/DIV5/SASC/project-013-motor/analysis/runs/BWA_chipcap/BAMS/GFF/H3K4me1.gff' | |
| Feb 13, 2015 at 13:44 | comment | added | Sander Van der Zeeuw | thanks, i was really confused by this. Strange is that if i try to run the makefile on command line and it is not between ' ' it will not work, so therefor i thought that this is also the case while running from bash script. | |
| Feb 13, 2015 at 13:39 | history | answered | choroba | CC BY-SA 3.0 |