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    instead of md5deep use hashdeep on ubuntu 16.04 because md5deep package is just a transitional dummy for hashdeep. Commented Nov 8, 2017 at 15:22
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    I've tried hashdeep. It outputs not only hashes but also some header including ## Invoked from: /home/myuser/dev/ which is your current path and ## $ hashdeep -s -r -l ~/folder/. This got to sort, so the final hash will be different if you change your current folder or command line. Commented Aug 23, 2018 at 8:28