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known_hostsare stored in my users local folder. Where as my SSHFSknown_hostsare stored in my root directory. This probably happens because when I just use ssh I don't prefix it with sudo, but I do when using SSHFS because I need root permissions to mount to/mnt/. I could probably fix this by creating a sub directory in/mnt/sshfs/and giving my user read/write access to that one and I'd never have to worry about the/root/.ssh/known_hostsissue.