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  1. LiftoverIndel LiftoverIndel Public

    Tool to liftover variants between references in an indel-aware manner

    Python

  2. phasing_T2T phasing_T2T Public

    Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.

    Jupyter Notebook 15

  3. PiMaker PiMaker Public

    Tool to calculate nucleotide diversity statistics in large pooled population datasets

    Python 1

  4. shapeit5 shapeit5 Public

    Forked from odelaneau/shapeit5

    Segmented HAPlotype Estimation and Imputation Tool

    C++