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@ScottishCovidResponse @viralemergence @streickerlab

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nardus/README.md

Nardus Mollentze

Top Langs Top Langs

Analysis pipelines

ace2 haystack zoonotic_rank hiv_growth_rates isg_composition

ace2 haystack zoonotic_rank hiv_growth_rates isg_composition

Libraries

beast_utils geo_features

beast_utils geo_features

Popular repositories Loading

  1. zoonotic_rank zoonotic_rank Public

    Code and data used in Mollentze et al. (2021) "Identifying and prioritizing potential human-infecting viruses from their genome sequences".

    R 18 12

  2. beast_utils beast_utils Public

    A python library for generating and manipulating BEAST 1 XML files

    Python 4

  3. isg_composition isg_composition Public

    Code for the machine learning component of Shaw, Rihn, Mollentze, et al. (2021) "The ‘antiviral state’ has shaped the CpG composition of the vertebrate interferome".

    R 2

  4. nardusmollentze.com nardusmollentze.com Public

    HTML

  5. SCRCdataAPI SCRCdataAPI Public

    Forked from FAIRDataPipeline/rDataPipeline

    Package for hdf5 processing in R

    R

  6. covid-uk covid-uk Public

    Forked from ScottishCovidResponse/covid-uk

    A fork of LSHTM's COVID-19 model to adapt to our data

    R