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1. ryder ryder Public

   Normalization and Differential Analysis of Epigenomic Data (DNase-seq, ATAC-seq, CUT&RUN, MNase-seq, ChIP-seq) Using Internal References

   Python 3

2. cLoops2 cLoops2 Public

   Enhanced and elegant flexible peak/loop/domain -calling and analysis tool for 1D/3D genomic data.

   Python 53 11

3. cLoops cLoops Public

   Accurate and flexible loops calling tool for 3D genomic data.

   Python 114 18