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  • IDEAYA Biosciences
  • San Francisco, CA

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  1. BD2KGenomics/protect BD2KGenomics/protect Public

    Python 30 13

  2. DataBiosphere/toil DataBiosphere/toil Public

    A WDL, CWL and Python API supporting easy-to-use workflow engine. It is scalable, efficient and cross-platform (Linux/macOS).

    Python 927 245

  3. BD2KGenomics/s3am BD2KGenomics/s3am Public

    A fast, parallel, streaming multipart uploader for S3

    Python 14 6

  4. Transgene Transgene Public

    This is a repository to host the transgene tool. Transgene takes a snpeffed vcf and a peptide fasta , and returns 3 peptide fastas containing 9-, 10- and 15-mers harboring the called mutations

    Python 1 1

  5. bioinfo_tool_wrappers bioinfo_tool_wrappers Public

    General Python Wrappers for bioinformatics needs.

    Python 1

  6. rankboost rankboost Public

    The scripts that conduct the rank boosting step in the precision immuno pipeline

    Python