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1. shortread_denovo_assembly shortread_denovo_assembly Public

   We perform denovo genome assembly using seven different tools masuRCA, soapdenovo2, spaDes, velvet, minia, striDe and platanus, identify and correct misaassemblies and check the assembly quality us…

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2. egeza egeza Public

   Config files for my GitHub profile.

3. modules modules Public

   Forked from nf-core/modules

   Repository to host tool-specific module files for the Nextflow DSL2 community!

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4. bacterial_transcriptomics bacterial_transcriptomics Public

   Forked from jambler24/bacterial_transcriptomics

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5. bacterial_variant_calling bacterial_variant_calling Public

   Forked from uct-cbio/bacterial_variant_calling

   A pipeline for variant calling on bacterial genomes created with Nextflow and singularity / docker

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6. nf-rnaSeqCount nf-rnaSeqCount Public

   Forked from phelelani/nf-rnaSeqCount

   Assembly and differential expression analysis

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