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1. HMAS-SNP-calling HMAS-SNP-calling Public

   Testing SNP calling methods for HMAS data (downstream of HMAS QC)

   HTML 1

2. genome-assembly genome-assembly Public

   Contains scripts used during "Genome Assembly" portion of BIOL7210

   Perl

3. HMAS-QC-Pipeline HMAS-QC-Pipeline Public

   A pipeline for performing quality control on HMAS data, in preparation for downstream MLST-like or AMR-like analyses.

   Python 3

4. CV CV Public

   My CV and resume

   HTML

5. Ubuntu-Setup Ubuntu-Setup Public

   Contains information I use to set up my PC builds (or WSL) when I screw them up

6. HMAS-Positive-Controls HMAS-Positive-Controls Public

   Data pertaining to the Enterics AMR Primer Panel positive controls design and testing (2019). The objective was to design positive controls for the highly-multiplexed amplicon sequencing (HMAS) pri…

   Python