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1. nufeb-designer nufeb-designer Public

   Graphical User Interface for creating NUFEB simulation configurations

   Python

2. nufeb/NUFEB-2 nufeb/NUFEB-2 Public

   NUFEB development repository

   C++ 7 11

3. SParMorIA-Sludge-Particle-Morphological-Image-Analysis SParMorIA-Sludge-Particle-Morphological-Image-Analysis Public

   Batchfile

4. get_to_know_phyloseq get_to_know_phyloseq Public

   An interactive Jupyter-based tutorial prepared for the de los Reyes lab, interested colleagues, and the North Carolina State University BIT 477/577 Metagenomics course

   Jupyter Notebook

5. agent_based_biofilm_drift agent_based_biofilm_drift Public

   Code, data, and text supporting a paper about quantifying drift vs selection using an agent-based biofilm model

   R 1

6. ctb-floc-size-control-analysis ctb-floc-size-control-analysis Public

   Analysis code and smaller datasets for the paper "Controlling Aerobic Biological Floc Size using Couette Taylor Bioreactors"

   PostScript