SPIRO is a Smart Plate Imaging Robot
science raspberry-pi biology open-hardware microbiology arabidopsis plant-science biological-imaging
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Feb 23, 2026 - Python
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biological-imaging
Medical imaging is the technique and process of creating visual representations of the interior of a body for clinical analysis, and medical intervention.
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🦴 Playground demonstrating the radon transform
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Oct 2, 2021 - Swift
Comprehensive pipeline for cell segmentation, tracking, and correlation analysis in time-lapse microscopy data. Utilizes deep learning models (Cellpose) for segmentation, with integrated refinement, tracking, and correlation analysis of dynamic cellular behaviors. Developed as part of a Master’s thesis project at KTH Royal Institute of Technology.
python deep-learning image-processing microscopy cell-segmentation cell-tracking time-lapse-imaging napari biological-imaging cellpose
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May 30, 2025 - Jupyter Notebook
Lecture Materials and many embedded exercises (ImageJ, UCSF Chimera, X3DOM, Three.js)
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Jan 8, 2024 - ImageJ Macro
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