In this simplified code below, I'd like to display two plots within Manipulate, and use the Locator controltype to set the value of x relative to its position within the first plot only. With the Print[x] command inserted it is obvious that the locator is using the coordinates of the entire graphics plane.
Manipulate[ Print[x]; GraphicsRow[{ListLinePlot[{x, {0, 0}}, PlotRange -> {{0, 2}, {0, 2}}], ListLinePlot[{x, {2, 2}}, PlotRange -> {{0, 2}, {0, 2}}]}], {{x, {0, 0}, {2, 2}}, ControlType -> Locator}] 
