All

27 repositories

SBML.jl
Public
Julia interface to the Systems Biology Markup Language (SBML) library
modeling systems-biology cobra
modeling systems-biology cobra libsbml sbml
Julia
•
Apache License 2.0
•12•30•4•0•Updated Dec 1, 2025Dec 1, 2025
clusterpainter
Public
simple metaclustering/annotation tool
visualization clustering
visualization clustering
Haskell
•
Apache License 2.0
•0•0•0•0•Updated Nov 4, 2025Nov 4, 2025
remotesom
Public
fast federated training of self-organizing maps with TLS-encrypted&authenticated traffic
Haskell
•
Apache License 2.0
•1•1•0•0•Updated Nov 4, 2025Nov 4, 2025
GigaSOM.jl
Public
Huge-scale, high-performance flow cytometry clustering in Julia
clustering som artificial-intelligence
clustering som artificial-intelligence neural-networks immunology self-organizing-map large-scale cytof flow-cytometry mass-cytometry
Julia
•
Apache License 2.0
•9•36•0•1•Updated Nov 3, 2025Nov 3, 2025
frog-specification
Public
TeX
•
Apache License 2.0
•2•2•1•0•Updated Oct 22, 2025Oct 22, 2025
leopard
Public
graphs for the LEOPARD study. They can be embedded in Adept dashboard
0•0•0•0•Updated Sep 18, 2025Sep 18, 2025
cwl-example-workflows
Public
Example workflows written in CWL
Common Workflow Language
•
Apache License 2.0
•6•0•0•0•Updated May 5, 2025May 5, 2025
COBREXA.jl
Public
Constraint-Based Reconstruction and EXascale Analysis
hpc high-performance julia
hpc high-performance julia cobra exascale constraint-based-modeling exascale-analysis
Julia
•
Apache License 2.0
•8•46•7•0•Updated Oct 23, 2024Oct 23, 2024
CuFluxSampler.jl
Public
GPU-accelerated algorithms for flux sampling in CUDA.jl
gpu julia cuda
gpu julia cuda sampling metabolism cobra metabolic-network
Julia
•
Apache License 2.0
•0•1•1•1•Updated Jun 19, 2024Jun 19, 2024
FBCModelTests.jl
Public
Tests for constraint-based metabolic models
Julia
•
Apache License 2.0
•5•6•7•2•Updated Feb 5, 2024Feb 5, 2024
PikaParser.jl
Public
Pure Julia implementation of pika parser.
julia parser-library
julia parser-library
Julia
•
Apache License 2.0
•3•56•2•0•Updated Oct 9, 2023Oct 9, 2023
foreman
Public
an application that automates the lifecycle of servers
Ruby
•
GNU General Public License v3.0
•1k•0•0•0•Updated Aug 17, 2023Aug 17, 2023
GigaScatter.jl
Public
Fast rasterization of huge amounts of tiny transparent points (in Julia)
Julia
•
Apache License 2.0
•0•9•4•0•Updated Mar 23, 2023Mar 23, 2023
sensitive-data-simulator
Public
(This repository contents is only temporary, the app is now under construction)
HTML
•0•0•0•0•Updated Mar 15, 2023Mar 15, 2023
icons-mirror
Public
mirror of icons and emojis for publishing online slides
CSS
•
Apache License 2.0
•0•0•0•0•Updated Mar 2, 2023Mar 2, 2023
basic-git-practice
Public
Basic git course - Practice repository
git jekyll basic
git jekyll basic website practice course
48•4•0•0•Updated Feb 21, 2023Feb 21, 2023
VkComputeUtils.jl
Public
Convenience utilities for running compute shaders with Vulkan in Julia
hpc gpu julia
hpc gpu julia vulkan gpu-computing
Julia
•
Apache License 2.0
•0•1•0•0•Updated Sep 30, 2022Sep 30, 2022
DistributedData.jl
Public
Simple distributed data manipulation and processing routines in Julia
data julia distributed
data julia distributed
Julia
•
Apache License 2.0
•0•17•0•0•Updated Mar 22, 2022Mar 22, 2022
gPAS
Public
A Generic Pseudonym Administration Service
Java
•
GNU Affero General Public License v3.0
•5•0•0•0•Updated May 12, 2021May 12, 2021
Fractalis
Public
[Back-end] A scalable open-source service for platform-independent interactive visual analysis of biomedical data
Python
•
Apache License 2.0
•3•8•0•0•Updated Apr 20, 2021Apr 20, 2021
roadmap
Public
DCC/UC3 collaboration for a data management planning tool
Ruby
•
MIT License
•118•0•0•0•Updated Mar 26, 2021Mar 26, 2021
advanced-git-practice
Public
Practice repository advanced git training.
9•1•0•0•Updated Mar 18, 2021Mar 18, 2021
tagger
Public
C++
•
BSD 2-Clause "Simplified" License
•9•0•0•0•Updated Sep 17, 2020Sep 17, 2020
mamba
Public
Python
•
Other
•1•0•0•0•Updated Sep 16, 2020Sep 16, 2020
jekyll-paginate-v2
Public
Pagination Generator for Jekyll 3 (enhanced replacement for the old built-in jekyll-paginate gem) ⛺
Ruby
•
MIT License
•284•0•0•0•Updated Feb 8, 2020Feb 8, 2020
Fractal.js
Public
[Front-end] A scalable open-source service for platform-independent interactive visual analysis of biomedical data
Vue
•
Apache License 2.0
•1•2•0•0•Updated Apr 12, 2019Apr 12, 2019
Fractalis-Issues
Public
Public issue tracker for the entire Fractalis project
0•0•16•0•Updated Jul 18, 2018Jul 18, 2018

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Luxembourg Centre for Systems Biomedicine

All

All

27 repositories

SBML.jl

clusterpainter

remotesom

GigaSOM.jl

frog-specification

leopard

cwl-example-workflows

COBREXA.jl

CuFluxSampler.jl

FBCModelTests.jl

PikaParser.jl

foreman

GigaScatter.jl

sensitive-data-simulator

icons-mirror

basic-git-practice

VkComputeUtils.jl

DistributedData.jl

gPAS

Fractalis

roadmap

advanced-git-practice

tagger

mamba

jekyll-paginate-v2

Fractal.js

Fractalis-Issues

All

All

Repositories list

27 repositories