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hamidghaedi/README.md

Hi there 👋

My name is Hamid and I am a genomic data analyst

  • 🌱 Pre-building mode activated!
  • 👯 I'd be happy to collaborate, let's have a virtual coffee chat!
  • 📫 How to reach me: qaedi65[at]gmail.com
  • ⚡ Fun fact: Huge fan of wildlife documentaries!

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  1. Enrichment-Analysis Enrichment-Analysis Public

    From RNA-seq raw reads to enriched pathways by DEGs

    33 15

  2. scRNA_seq-analysis scRNA_seq-analysis Public

    scRNA analysis of public dataset on bladder cancer

    18 4

  3. scRNA_cell_annotation scRNA_cell_annotation Public

    Assigning cell labels w/o ref data (Tabula Sapiens)

  4. scRNA_velocity_analysis scRNA_velocity_analysis Public

    scRNA velocity analysis using Seurat, velocyto and scvelo

    7

  5. scRNA-cell-cell-communication-analysis scRNA-cell-cell-communication-analysis Public

    A repo on cell-cell interaction inference in scRNA dataset

    R 1 1

  6. sequencing_benchmark_datasets sequencing_benchmark_datasets Public

    A repo on datasets used in Sequencing benchmarked study, Nat Biotech, September 2021

    Python 1