Comprehensive design of CRISPR gRNAs for nucleases and base editors
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
a guideRNA database generation tool
Collection of R packages that work in harmony for CRISPR gRNA design
Tutorials for the crisprVerse
CRISPR, faster, better – The Crackling method for whole-genome target detection
Visualization of CRISPR guide RNAs (gRNAs)
A guideRNA design tool for the modern era.
A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.
Useful human and mouse data for the crisprVerse ecosystem
Base functions and classes for CRISPR gRNA design
CRISPR Guide RNA Designer
Bowtie-based alignment of CRISPR gRNA spacer sequences
Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.
Pre-trained models for the crisprScore package
Shiny interface for CRISPR gRNAs designed with the crisprVerse
Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.10+
BWA-based alignment of CRISPR gRNA spacer sequences
Variant- and Haplotype-aware CRISPR guide design toolkit
⛓️ Automating construction of oligo library sequences for oligo array synthesis.
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