Genome-wide extraction of real-valued signals hidden in noisy multisample HTS data
- Updated
Dec 3, 2025 - Python
#
cut-and-run
Here are 4 public repositories matching this topic...
Step-by-step instructions and Snakemake pipeline for processing Cut&Run data
- Updated
Sep 8, 2023 - Python
qPCR Plate Planner is a browser based tool to streamline the design, execution, and analysis of qPCR experiments. It is particularly suited for chromatin profiling workflows such as CUT&RUN, CUT&Tag, and ChIP-qPCR, where comparative epigenetic mark enrichment is quantified using the ΔΔCt method
epigenetics workflow-automation experimental-design qpcr-analysis gene-quantification master-mix plate-layout-design cut-and-run workflow-automation-tools fold-change-analysis chip-qpcr 384-well ddct-analysis chromatin-enrichment
- Updated
Oct 27, 2025 - HTML
cccTeqy is a ChIP-seq, CUT&RUN, and CUT&Tag processing engine.
- Updated
Dec 1, 2025 - Shell
Improve this page
Add a description, image, and links to the cut-and-run topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the cut-and-run topic, visit your repo's landing page and select "manage topics."