iGEM/UCSD evolutionary biology and bioinformatics group

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hyphy hyphy Public

HyPhy: Hypothesis testing using Phylogenies

HyPhy 245 69
hivtrace hivtrace Public

JavaScript 25 15
phylotree.js phylotree.js Public

Interactive viewer of phylogenetic trees

JavaScript 192 78

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cawlign Public

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C++ 3 MIT 3 4 0 Updated Dec 3, 2025
datamonkey-js-server Public

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JavaScript 3 7 1 3 Updated Dec 3, 2025
DRHIP Public
Data Reduction for HyPhy with Inference Processing. A toolkit for analyzing and summarizing HyPhy evolutionary selection analysis results

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Python 0 MIT 1 1 0 Updated Dec 3, 2025
hivtrace-viz Public

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JavaScript 10 11 0 1 Updated Dec 3, 2025
hyphy Public
HyPhy: Hypothesis testing using Phylogenies

veg/hyphy’s past year of commit activity

HyPhy 245 69 17 0 Updated Dec 2, 2025
datamonkey-js Public
Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

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JavaScript 10 9 0 2 Updated Dec 2, 2025
silverback-user-manual Public
silverback-user-manual

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JavaScript 0 0 0 0 Updated Dec 1, 2025
CAPHEINE Public
Automated evolutionary annotation of existing datasets using Nextflow

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Nextflow 0 MIT 0 6 0 Updated Nov 20, 2025
hivtrace Public

veg/hivtrace’s past year of commit activity

JavaScript 25 MIT 15 5 1 Updated Nov 19, 2025
phylotree.js Public
Interactive viewer of phylogenetic trees

veg/phylotree.js’s past year of commit activity

JavaScript 192 MIT 78 58 1 Updated Nov 14, 2025

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