Skip to content
Navigation Menu
Toggle navigation
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Spark
Build and deploy intelligent apps
GitHub Models
Manage and compare prompts
MCP Registry
New
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search or jump to...
Search code, repositories, users, issues, pull requests...
Search syntax tips
Provide feedback
Saved searches
Use saved searches to filter your results more quickly
Sign in
Sign up
Appearance settings
Resetting focus
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
PacificBiosciences
/
pbcommand
Public
Notifications
You must be signed in to change notification settings
Fork
12
Star
10
Code
Issues
13
Pull requests
1
Actions
Wiki
Security
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Wiki
Security
Insights
Commits
Breadcrumbs
History for
pbcommand
tests
on
develop
User selector
All users
All time
Commit History
Commits on Aug 23, 2023
[SL-9663] new SMRT Link client
natechols
committed
0955689
Copy full SHA for 0955689
Commits on May 26, 2022
[SL-8098] more control of CSV formatting
natechols
committed
faef67a
Copy full SHA for faef67a
Commits on Jan 18, 2022
[SL-7546] add name to fast dataset metadata loading
natechols
committed
79df482
Copy full SHA for 79df482
Commits on Jan 6, 2022
[SL-7492] use old case
natechols
committed
9df6c9a
Copy full SHA for 9df6c9a
Commits on Jul 29, 2021
[SL-7048] fix camel case
natechols
committed
7424b60
Copy full SHA for 7424b60
Commits on Oct 23, 2020
[SL-6414] support merging attributes with string values
Nathaniel Echols
committed
9060234
Copy full SHA for 9060234
Commits on Aug 31, 2020
[SL-6066] overhaul Pipeline model for better inline documentation
Nathaniel Echols
committed
e133c50
Copy full SHA for e133c50
Commits on Nov 22, 2019
Use pytest exclusively
pb-dseifert
committed
6552139
Copy full SHA for 6552139
PEP8ify
pb-dseifert
committed
646f3b2
Copy full SHA for 646f3b2
Commits on Nov 20, 2019
[SL-5210] more cleanup and removal of obsolete code
natechols
committed
4bda71f
Copy full SHA for 4bda71f
Commits on Nov 19, 2019
[SL-5176] remove nose dependency
natechols
committed
cc6e23e
Copy full SHA for cc6e23e
Commits on Nov 18, 2019
Remove py2 compatibility crutches
pb-dseifert
committed
072671d
Copy full SHA for 072671d
Commits on Nov 14, 2019
[SL-5179] final python3 changes
natechols
committed
5c01f42
Copy full SHA for 5c01f42
Commits on Oct 9, 2019
[SL-5063] remove all remaining traces of tool contracts, and finish python3 compatibility
natechols
committed
4ab923a
Copy full SHA for 4ab923a
Commits on Oct 8, 2019
[SL-5002] deprecate all tool-contract-related functionality and remove obsolete tests
natechols
committed
907fd33
Copy full SHA for 907fd33
Commits on Jul 23, 2019
fix test
natechols
committed
2905cff
Copy full SHA for 2905cff
Commits on Jul 19, 2019
update test
natechols
committed
012fff5
Copy full SHA for 012fff5
Commits on Jul 12, 2019
legacy pbsmrtpipe pipeline model (still used for display purposes)
natechols
committed
0b084d7
Copy full SHA for 0b084d7
Commits on Jul 11, 2019
Cannot use relative import with pytest dir
Christopher Dunn
committed
0ee5ee4
Copy full SHA for 0ee5ee4
rm __init__.py to avoid installing tests/ directory
Christopher Dunn
committed
0887c1b
Copy full SHA for 0887c1b
Commits on Jun 21, 2019
add simple task report in cromwell environment
natechols
committed
f555e54
Copy full SHA for f555e54
Commits on May 17, 2019
fix test
natechols
committed
c552760
Copy full SHA for c552760
Commits on May 16, 2019
model cleanup
natechols
committed
e81eefc
Copy full SHA for e81eefc
Commits on May 13, 2019
cd back to starting dir
natechols
committed
2829b2e
Copy full SHA for 2829b2e
central alarm handling for SMRT Link
natechols
committed
9b2ea89
Copy full SHA for 9b2ea89
Commits on Apr 4, 2019
Unicode is fine in python3
Christopher Dunn
committed
e4e6199
Copy full SHA for e4e6199
future -2 tests/
Christopher Dunn
committed
ee34eb1
Copy full SHA for ee34eb1
Skip validation when missing avro
Show description for b79b60b
Christopher Dunn
committed
b79b60b
Copy full SHA for b79b60b
Fix assertRaises()
Christopher Dunn
committed
e940a33
Copy full SHA for e940a33
No assertItemsEqual
Christopher Dunn
committed
e3534af
Copy full SHA for e3534af
Commits on Apr 3, 2019
Avoid e.message (gone in py3)
Christopher Dunn
committed
3b51940
Copy full SHA for 3b51940
skip if no avro
Christopher Dunn
committed
414bec6
Copy full SHA for 414bec6
assertEqual <- assertEquals (deprecated)
Christopher Dunn
committed
e982c62
Copy full SHA for e982c62
Commits on Jan 2, 2019
Fix test_get_dataset_metadata (and do not skip in bamboo)
Christopher Dunn
committed
eb19d82
Copy full SHA for eb19d82
Remove old (skipped) _TestUtil
Show description for 65d53a0
Christopher Dunn
committed
65d53a0
Copy full SHA for 65d53a0
Pagination
Previous
Next
You can’t perform that action at this time.