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1. CD40-Immunosome-Tool CD40-Immunosome-Tool Public

   Reproducible Systems Immunology Framework for Modeling CD40–TRAF6 Signaling Dynamics and CRISPR Synergy

   Python

2. Zebrafish-3D-Morphometry-Suite-yash Zebrafish-3D-Morphometry-Suite-yash Public

   Automated 3D morphometric pipeline to quantify nuclear hypertrophy in Cdh2-deficient zebrafish embryos using Python and Streamlit.

   Python

3. PanGen-AI PanGen-AI Public

   Reproducible Python framework integrating pangenome graphs, deep learning variant prediction, CRISPR design, and genome visualization

   Python

4. scrna-bias-detector scrna-bias-detector Public

   Multi-module Python framework for interpretable batch-effect detection, anomaly identification, and quality control in single-cell RNA-seq data.

   Python