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1. scRepertoire scRepertoire Public

   Forked from BorchLab/scRepertoire

   A toolkit for single-cell immune profiling

   R 1

2. seurat seurat Public

   Forked from satijalab/seurat

   R toolkit for single cell genomics

   R

3. CATALYST CATALYST Public

   Forked from HelenaLC/CATALYST

   Cytometry dATa anALYsis Tools

   R

4. TCRClone_NumericalSummary TCRClone_NumericalSummary Public archive

   To generate numerical tables summarising the clonal expansion and clonal sharing between clusters from Seurat Object with appended TCR info, e.g., output from scRepertoire

   1

5. squidpy squidpy Public

   Forked from scverse/squidpy

   Spatial Single Cell Analysis in Python

   Python

6. sage_broccoliqn sage_broccoliqn Public archive

   Practical utilities for scRNAseq from the Sage lab

   HTML 1