I have a bunch of text (input) files with the name
foo_bar_abc_1_01_geh_file.in foo_bar_abc_1_02_geh_file.in foo_bar_abc_1_03_geh_file.in ... ... foo_bar_abc_1_1000_geh_file.in I use following command to run these multiple jobs (in a HPC cluster)
for f in foo*.in; do qsub -N test -v infile=$f run.pbs The problem in this one-line script is that the Job Name (in the cluster) is same for all the jobs in queue (i.e., test is the name for all jobs).
I would like to name each job something like test01, test02, test03...test1000 (numbers taken/extracted from the corresponding file names. For example,
#For foo_bar_abc_1_01_geh_file.in, the Job Name should be test01, #For foo_bar_abc_1_02_geh_file.in, the Job Name should be test02, #For foo_bar_abc_1_100_geh_file.in, the Job Name should be test100, etc. How to do this is bash?
