seqExampleFileName: Example files In SeqArray: Data management of large-scale whole-genome sequence variant calls Description Usage Arguments Value Author(s) Examples
Description
The example files of VCF and GDS format.
Usage
1
seqExampleFileName(type=c("gds", "vcf", "KG_Phase1"))
Arguments
type either "gds" (by default) or "vcf"
Value
Return the path of a VCF file in the package if type="vcf", or the path of a GDS file if type="gds". If type="KG_Phase1", return the path of GDS file on Chromosome 22 of the 1000 Genomes Phase 1 project.
Author(s)
Xiuwen Zheng
Examples
1 2 3 4 5
seqExampleFileName("gds") seqExampleFileName("vcf") seqExampleFileName("KG_Phase1")
SeqArray documentation built on Nov. 8, 2020, 5:08 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) Examples
Description
The example files of VCF and GDS format.
Usage
1 | seqExampleFileName(type=c("gds", "vcf", "KG_Phase1")) |
Arguments
type | either "gds" (by default) or "vcf" |
Value
Return the path of a VCF file in the package if type="vcf", or the path of a GDS file if type="gds". If type="KG_Phase1", return the path of GDS file on Chromosome 22 of the 1000 Genomes Phase 1 project.
Author(s)
Xiuwen Zheng
Examples
1 2 3 4 5 | seqExampleFileName("gds") seqExampleFileName("vcf") seqExampleFileName("KG_Phase1") |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.